LINC02796, variants, traits, and what the research shows

LINC02796 is a non-coding RNA gene with catalogued variants linked to mental health, neurological, metabolic, sleep, and hormonal traits in GWAS research.

High-magnitude variants on file
141
With published research summary
29
Trait themes
4

LINC02796 - what this gene does

LINC02796 (long intergenic non-coding RNA 02796 - a class of RNA molecule that does not encode protein but may play regulatory roles in the genome) appears across genome-wide association studies (GWAS - research that scans many people's genomes for variants statistically linked to a trait) in mental health, neurological, metabolic, sleep, and hormonal trait domains.

Key takeaways

  • Six variants in this gene independently link to mental health traits - the most concentrated theme in its profile
  • Additional associations span neurological function, metabolic health, sleep, and hormonal traits
  • The highest-magnitude variants include several with dedicated published research pages
  • 141 total variants are catalogued, but most lack detailed study summaries - the evidence picture is still developing
  • All associations are population-level GWAS signals, not predictors for any individual

Notable variants

The top-magnitude variants (score 4.50) include a cluster of mental health associations: rs12143162, rs2568952, rs61491549, rs782212, and rs9425089 all carry this trait label. A neurological signal appears at rs12724444, and a metabolic signal at rs527320094. Two additional magnitude-4.50 variants - rs10889966 and rs11210074 - have published research pages but no trait label is available in the current dataset.

Trait associations

Mental health is the most represented domain, with six catalogued variants pointing to it: rs12143162, rs2568952, rs61491549, rs782212, rs9425089, and rs11209948 - convergence across multiple independent variants strengthens the signal relative to any single finding. Neurological associations appear at rs12724444 and rs10889994. Metabolic links surface at rs10789336, rs11209947, rs11209951, and rs527320094. Additional trait domains include sleep (rs111991969, rs112913804), hormonal (rs11209943), and nutritional (rs11209952).

Evidence quality

The strongest on-file signals carry a magnitude score of 4.50 and include variants with dedicated published research pages (rs10889966, rs11210074, rs12143162). A second tier at magnitude 2.20 also contains multiple published-page variants: rs10493500, rs10789336, rs10889994, rs111991969, rs11209943, rs11209947, rs11209948, rs11209951, rs11209952, and rs112913804. Of 141 total catalogued variants, only 29 have prior research summaries; detailed effect sizes, sample sizes, and replication status are not available in the current dataset for most entries, limiting how precisely the strength of individual associations can be characterised.

What this is NOT

These variants are population-level statistical signals identified in large GWAS studies - they describe patterns across groups and cannot predict outcomes for any specific individual. Nothing on this page constitutes medical advice, a diagnosis, or a recommendation for any action.

Traits this gene affects

  • mental_health
  • neurological
  • metabolic

Top variants in LINC02796

Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.

rsidMagnitudePrimary trait
rs108899664.5
rs112100744.5
rs121431624.5mental_health
rs127244444.5neurological
rs1452798144.5
rs25689524.5mental_health
rs5273200944.5metabolic
rs614915494.5mental_health
rs7822124.5mental_health
rs94250894.5mental_health
rs104935002.2
rs107893362.2metabolic
rs108899942.2neurological
rs1119919692.2sleep
rs112099432.2hormonal
rs112099472.2metabolic
rs112099482.2mental_health
rs112099512.2metabolic
rs112099522.2nutrition
rs1129138042.2sleep