rs112817873 - PTCSC2
Magnitude 2.2 · 1 study on file
Reported associations
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Whole-genome sequence-based analysis of thyroid function - Unknown journal (n.d.) · Unknown authors · PubMed 25743335
ABSTRACT: Normal thyroid function is essential for health, but its genetic architecture remains poorly understood. Here, for the heritable thyroid traits thyrotropin (TSH) and free thyroxine (FT4), we analyse whole-genome sequence data from the UK10K project (N=2,287). Using additional whole-genome sequence and deeply imputed data sets, we report meta-analysis results for common variants (MAF≥1%) associated with TSH and FT4 (N=16,335). For TSH, we identify a novel variant in SYN2 (MAF=23.5%, P=6.15 × 10−9) and a new independent variant in PDE8B (MAF=10.4%, P=5.94 × 10−14). For FT4, we report a low-frequency variant near B4GALT6/SLC25A52 (MAF=3.2%, P=1.27 × 10−9) tagging a rare TTR variant (MAF=0.4%, P=2.14 × 10−11). All common variants explain ≥20% of the variance in TSH an
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Lifestyle context
Concrete actions anchored to the cited research. We do not prescribe, we describe.
Discuss with your doctor
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TSH interpretation in context of FOXE1 genetic variant Moderate
rs112817873 T allele associated with genetically lower TSH levels; borderline or mildly elevated results may reflect genetic predisposition rather than thyroid dysfunction
mention variant when TSH results are reviewed, especially if borderline