rs1011115786 - IQCM

Magnitude 2.2 · 1 study on file

Reported associations

  • A cross-population atlas of genetic associations for 220 human phenotypes. - Nature genetics (2021) · Sakaue S, Kanai M, Tanigawa Y, Karjalainen J, Kurki M, Koshiba S, Narita A, Konuma T, Yamamoto K, Akiyama M, Ishigaki K, Suzuki A, Suzuki K, Obara W, Yamaji K, Takahashi K, Asai S, Takahashi Y, Suzuki T, Shinozaki N, Yamaguchi H, Minami S, Murayama S, Yoshimori K, Nagayama S, Obata D, Higashiyama M, Masumoto A, Koretsune Y, Ito K, Terao C, Yamauchi T, Komuro I, Kadowaki T, Tamiya G, Yamamoto M, Nakamura Y, Kubo M, Murakami Y, Yamamoto K, Kamatani Y, Palotie A, Rivas MA, Daly MJ, Matsuda K, Okada Y · PubMed 34594039

    Current genome-wide association studies do not yet capture sufficient diversity in populations and scope of phenotypes. To expand an atlas of genetic associations in non-European populations, we conducted 220 deep-phenotype genome-wide association studies (diseases, biomarkers and medication usage) in BioBank Japan (n = 179,000), by incorporating past medical history and text-mining of electronic medical records. Meta-analyses with the UK Biobank and FinnGen (n = 628,000) identified ~5,000 new loci, which improved the resolution of the genomic map of human traits. This atlas elucidated the landscape of pleiotropy as represented by the major histocompatibility complex locus, where we conducted HLA fine-mapping. Finally, we performed statistical decomposition of matrices of phenome-wid


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Lifestyle context

Concrete actions anchored to the cited research. We do not prescribe, we describe.

Diet

  • Mediterranean or heart-healthy diet pattern Moderate

    Plant-based diets and reduced saturated fat lower LDL cholesterol; relevant for genetic LDL predisposition.

    Adopt Mediterranean-style diet: emphasize vegetables, whole grains, legumes, nuts, olive oil

Discuss with your doctor

  • Cardiovascular risk assessment and lipid management Moderate

    Genetic predisposition to elevated LDL warrants evaluation of cardiovascular risk and discussion of management strategies.

    Discuss cardiovascular risk, statin use, and lifestyle interventions at next visit

Screening

  • LDL cholesterol level Moderate

    Genetic variation in IQCM is associated with increased LDL cholesterol, a major cardiovascular risk factor.

    Check lipid panel at least annually; discuss baseline and monitoring frequency with healthcare provider