SYNE2, variants, traits, and what the research shows

SYNE2 is a human gene with thousands of catalogued variants linked to musculoskeletal traits, covering muscles, bones, joints, and connective tissue.

High-magnitude variants on file
2310
With published research summary
19
Trait themes
1

SYNE2 - what this gene does

SYNE2 is a gene whose catalogued variants point consistently toward the musculoskeletal domain - the broad category covering muscles, bones, joints, and connective tissue. Based on the variant data available, the entire research footprint for this gene sits within that trait area.

Key takeaways

  • Over 2,300 variants are catalogued at this gene, with a consistent theme of musculoskeletal associations
  • All variants with available research annotations share the same musculoskeletal trait label, suggesting a focused biological signal
  • No variant here is a deterministic predictor of any musculoskeletal condition for any individual
  • Detailed effect sizes and study-level data for specific variants are still being compiled
  • These are population-level statistical signals - they describe patterns across large groups, not personal outcomes

Notable variants

The highest-signal variants currently on file - including rs1007865427, rs1018808319, rs1026697162, rs112833938, and rs113146258 - are each associated with musculoskeletal traits. Additional variants at the same signal level, such as rs116823334, rs117647282, and rs138419017, share the same trait category and magnitude. Because detailed research summaries are not yet available for these variants, specific conditions, effect sizes (such as odds ratios or beta coefficients), and sample sizes cannot be reported at this time.

Trait associations

All annotated variants at this locus point to the musculoskeletal domain. Variants including rs1034591406, rs138514054, rs138644399, rs138769395, and rs139187222 each carry a musculoskeletal trait label. The consistency of this theme across multiple independent variants - 19 of the 2,310 catalogued variants have associated research summaries on file - points to a recurring association between this gene and musculoskeletal biology, though specific conditions and mechanistic details are not yet available from the data provided.

Evidence quality

Detailed research summaries - including odds ratios (the ratio of the odds of a condition in people carrying a variant versus those without it), sample sizes, and replication status - are not yet available for individual variants at this locus. All listed variants share a musculoskeletal trait label, establishing a thematic signal, but without per-variant study data it is not possible to assess whether findings derive from large replicated GWAS (genome-wide association study - a type of research that scans many thousands of people's genomes for variants statistically associated with a trait) cohorts or smaller preliminary analyses. The evidence base here should be treated as preliminary until richer summaries are available.

What this is NOT

The variants described here are population-level statistical associations drawn from group-level research, not deterministic predictors of any individual's health status or disease risk. Nothing on this page constitutes medical advice, a diagnosis, or a recommendation to take any action.

Traits this gene affects

  • musculoskeletal

Top variants in SYNE2

Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.

rsidMagnitudePrimary trait
rs10078654275.5musculoskeletal
rs10188083195.5musculoskeletal
rs10266971625.5musculoskeletal
rs10345914065.5musculoskeletal
rs1128339385.5musculoskeletal
rs1131462585.5musculoskeletal
rs1168233345.5musculoskeletal
rs11685296665.5musculoskeletal
rs1176472825.5musculoskeletal
rs1180049855.5musculoskeletal
rs12113783755.5musculoskeletal
rs13231409005.5musculoskeletal
rs13239467515.5musculoskeletal
rs1384190175.5musculoskeletal
rs1385140545.5musculoskeletal
rs1386443995.5musculoskeletal
rs1387693955.5musculoskeletal
rs1387899385.5musculoskeletal
rs1387970585.5musculoskeletal
rs1391872225.5musculoskeletal