SYNE2, variants, traits, and what the research shows
SYNE2 is a human gene with thousands of catalogued variants linked to musculoskeletal traits, covering muscles, bones, joints, and connective tissue.
- High-magnitude variants on file
- 2310
- With published research summary
- 19
- Trait themes
- 1
SYNE2 - what this gene does
SYNE2 is a gene whose catalogued variants point consistently toward the musculoskeletal domain - the broad category covering muscles, bones, joints, and connective tissue. Based on the variant data available, the entire research footprint for this gene sits within that trait area.
Key takeaways
- Over 2,300 variants are catalogued at this gene, with a consistent theme of musculoskeletal associations
- All variants with available research annotations share the same musculoskeletal trait label, suggesting a focused biological signal
- No variant here is a deterministic predictor of any musculoskeletal condition for any individual
- Detailed effect sizes and study-level data for specific variants are still being compiled
- These are population-level statistical signals - they describe patterns across large groups, not personal outcomes
Notable variants
The highest-signal variants currently on file - including rs1007865427, rs1018808319, rs1026697162, rs112833938, and rs113146258 - are each associated with musculoskeletal traits. Additional variants at the same signal level, such as rs116823334, rs117647282, and rs138419017, share the same trait category and magnitude. Because detailed research summaries are not yet available for these variants, specific conditions, effect sizes (such as odds ratios or beta coefficients), and sample sizes cannot be reported at this time.
Trait associations
All annotated variants at this locus point to the musculoskeletal domain. Variants including rs1034591406, rs138514054, rs138644399, rs138769395, and rs139187222 each carry a musculoskeletal trait label. The consistency of this theme across multiple independent variants - 19 of the 2,310 catalogued variants have associated research summaries on file - points to a recurring association between this gene and musculoskeletal biology, though specific conditions and mechanistic details are not yet available from the data provided.
Evidence quality
Detailed research summaries - including odds ratios (the ratio of the odds of a condition in people carrying a variant versus those without it), sample sizes, and replication status - are not yet available for individual variants at this locus. All listed variants share a musculoskeletal trait label, establishing a thematic signal, but without per-variant study data it is not possible to assess whether findings derive from large replicated GWAS (genome-wide association study - a type of research that scans many thousands of people's genomes for variants statistically associated with a trait) cohorts or smaller preliminary analyses. The evidence base here should be treated as preliminary until richer summaries are available.
What this is NOT
The variants described here are population-level statistical associations drawn from group-level research, not deterministic predictors of any individual's health status or disease risk. Nothing on this page constitutes medical advice, a diagnosis, or a recommendation to take any action.
Traits this gene affects
- musculoskeletal
Top variants in SYNE2
Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.
| rsid | Magnitude | Primary trait |
|---|---|---|
| rs1007865427 | 5.5 | musculoskeletal |
| rs1018808319 | 5.5 | musculoskeletal |
| rs1026697162 | 5.5 | musculoskeletal |
| rs1034591406 | 5.5 | musculoskeletal |
| rs112833938 | 5.5 | musculoskeletal |
| rs113146258 | 5.5 | musculoskeletal |
| rs116823334 | 5.5 | musculoskeletal |
| rs1168529666 | 5.5 | musculoskeletal |
| rs117647282 | 5.5 | musculoskeletal |
| rs118004985 | 5.5 | musculoskeletal |
| rs1211378375 | 5.5 | musculoskeletal |
| rs1323140900 | 5.5 | musculoskeletal |
| rs1323946751 | 5.5 | musculoskeletal |
| rs138419017 | 5.5 | musculoskeletal |
| rs138514054 | 5.5 | musculoskeletal |
| rs138644399 | 5.5 | musculoskeletal |
| rs138769395 | 5.5 | musculoskeletal |
| rs138789938 | 5.5 | musculoskeletal |
| rs138797058 | 5.5 | musculoskeletal |
| rs139187222 | 5.5 | musculoskeletal |