SPTBN1, variants, traits, and what the research shows

SPTBN1 is a human gene with 321 catalogued variants, all linked to rare disease traits. Specific condition details are pending further study.

High-magnitude variants on file
321
With published research summary
16
Trait themes
1

SPTBN1 - what this gene does

All variants catalogued for SPTBN1 fall under a rare disease trait theme. Without additional research summaries, it is not possible to describe the specific conditions or mechanisms involved beyond this broad classification.

Key takeaways

  • All 20 listed variants for this gene are linked to a rare disease trait category.
  • The strongest signals carry a magnitude score of 5.50, the highest tier in this dataset.
  • No specific disease names or detailed effect sizes are available in the current data.
  • A total of 321 variants are on file for this gene, with research summaries pending.
  • These are population-level statistical signals, not predictions for any individual.

Notable variants

The variants with the highest magnitude scores (5.50) include rs139622861, rs148657379, rs1678619347, rs2103829011, rs2103829031, rs2103838734, rs2103842476, and rs2103866356, all classified under the rare disease trait theme. Three additional variants at magnitude 5.00, namely rs2103838550, rs2103866400, and rs2103898844, share the same trait classification.

Trait associations

The sole trait theme represented across all 20 listed variants is rare disease. This grouping spans the highest-magnitude entries (rs139622861, rs2549468222, and others at magnitude 5.50) and the next tier (rs2103838550, rs2103866400, rs2103898844 at magnitude 5.00). The consistent rare disease classification across every entry suggests this gene is relevant to uncommon heritable conditions, though no specific disease names or quantitative effect sizes are available in the current dataset.

Evidence quality

A total of 321 variants are on file for this gene, of which 20 are presented here. No individual research summaries have been compiled for this gene yet, so specific odds ratios (a measure of how much a variant changes the odds of a trait), sample sizes, or replication data are unavailable. The magnitude scores of 5.50 and 5.00 indicate these variants were flagged as potentially noteworthy, but without underlying study details, the strength and independence of evidence cannot be assessed. This entry should be treated as preliminary until SNP-level summaries are available.

What this is NOT

These variants represent population-level statistical signals and are not deterministic predictors of disease for any individual. This page does not prescribe, diagnose, or advise any course of action.

Traits this gene affects

  • rare_disease

Top variants in SPTBN1

Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.

rsidMagnitudePrimary trait
rs1396228615.5rare_disease
rs1486573795.5rare_disease
rs16786193475.5rare_disease
rs21038290115.5rare_disease
rs21038290315.5rare_disease
rs21038387345.5rare_disease
rs21038424765.5rare_disease
rs21038663565.5rare_disease
rs21039255595.5rare_disease
rs21039386445.5rare_disease
rs21040683955.5rare_disease
rs25494682225.5rare_disease
rs25495118765.5rare_disease
rs25495306855.5rare_disease
rs25495553435.5rare_disease
rs25495627595.5rare_disease
rs25495700275.5rare_disease
rs21038385505.0rare_disease
rs21038664005.0rare_disease
rs21038988445.0rare_disease