PDE4D, variants, traits, and what the research shows

PDE4D is a human gene whose documented variants all point to rare disease associations; detailed trait and functional data is still being developed.

High-magnitude variants on file
356
With published research summary
20
Trait themes
1

PDE4D - what this gene does

All 20 variants on file for PDE4D share a single trait theme - rare disease - making this gene a subject of interest in rare-disease research based on the current data. No detailed functional or mechanistic information can be drawn from the available variant summaries alone.

Key takeaways

  • Every documented variant for this gene maps to the rare disease trait category
  • Twenty of 356 on-file variants currently carry research data, all at magnitude 5.50
  • No single variant stands out above the others - all carry equal weight in current records
  • These are population-level associations, not individual-level predictions
  • Detailed trait breakdowns are not yet available; this characterization is still developing

Notable variants

The top-ranked variants on file - rs1057520731, rs1345148257, rs1554033934, rs2153393425, rs2479492253, rs387906744, and rs397514464 - are all linked to rare disease at a magnitude score of 5.50. They share the same broad trait designation, and no finer-grained trait detail is available from current summaries.

Trait associations

Rare disease is the sole trait theme represented across all 20 documented variants. This consistent clustering - seen across rs397514465, rs397514466, rs397514467, rs397514468, rs397515433, rs538879121, rs557226166, and others including rs371950648, rs372946517, and rs375617990 - suggests that genetic variation in this gene is relevant to rare disease biology, though the specific conditions involved are not described in the data currently on file.

Evidence quality

All 20 variants with current data share an identical magnitude score of 5.50 and the same broad trait label (rare disease), which limits fine-grained interpretation. No prior SNP summaries are available for this gene, so effect sizes, odds ratios, sample sizes, and replication status cannot be assessed from the present data. The remaining 336 of 356 total variants on file are not yet annotated. This is a preliminary characterization that should be treated as an early-stage signal pending fuller annotation.

What this is NOT

These variants represent population-level statistical associations, not deterministic predictions for any individual. This entry does not prescribe, diagnose, or recommend any course of action.

Traits this gene affects

  • rare_disease

Top variants in PDE4D

Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.

rsidMagnitudePrimary trait
rs10575207315.5rare_disease
rs13451482575.5rare_disease
rs15540339345.5rare_disease
rs21533934255.5rare_disease
rs24794922535.5rare_disease
rs24794931025.5rare_disease
rs25309627405.5rare_disease
rs25309628925.5rare_disease
rs3719506485.5rare_disease
rs3729465175.5rare_disease
rs3756179905.5rare_disease
rs3879067445.5rare_disease
rs3975144645.5rare_disease
rs3975144655.5rare_disease
rs3975144665.5rare_disease
rs3975144675.5rare_disease
rs3975144685.5rare_disease
rs3975154335.5rare_disease
rs5388791215.5rare_disease
rs5572261665.5rare_disease