ATP2B1, variants, traits, and what the research shows

ATP2B1 is a human gene with variants linked to rare disease categories and a single cardiovascular association, based on current genomic databases.

High-magnitude variants on file
138
With published research summary
24
Trait themes
1

ATP2B1 - what this gene does

Variants catalogued in ATP2B1 are associated primarily with rare disease categories, with one variant also linked to a cardiovascular trait. No SNP-level research summaries are yet available for this gene, so the entry below reflects trait-category signals drawn directly from the variant list.

Key takeaways

  • The nine highest-magnitude variants in this gene are all classified under rare disease categories
  • One variant, rs2135942244, is the only entry in the current dataset carrying a cardiovascular trait signal
  • 138 variants are on file in total; specific condition names and effect sizes are not yet documented
  • Trait labels here are broad category assignments - detailed disease names are pending SNP-level research summaries
  • Population-level associations do not predict individual outcomes

Notable variants

Nine variants share the highest recorded magnitude (5.50) for this gene and are all classified under rare disease: rs1033577592, rs1161061134, rs1433458409, rs1879993574, rs2540803653, rs2540803952, rs2540804052, rs2540882833, and rs902976276. Among the magnitude-5.00 variants, rs2135942244 stands apart as the sole cardiovascular-classified entry in this dataset; the remaining magnitude-5.00 variants - including rs1876205424, rs1879711772, rs1879993052, and rs1883642606 - are also classified under rare disease.

Trait associations

The dominant trait theme across ATP2B1's catalogued variants is rare disease: all nine magnitude-5.50 variants and ten of the eleven magnitude-5.00 variants shown here carry this classification, indicating that the strongest signals in this gene cluster around rare-disease phenotypes. A single cardiovascular association is present at rs2135942244 (magnitude 5.00). Because no SNP-level summaries are yet available, specific condition names for the rare disease entries cannot be reported from the current data alone.

Evidence quality

No SNP-level research summaries are currently available for ATP2B1 - the signals above are derived solely from variant magnitude scores and broad trait-category labels. Odds ratios, beta coefficients, sample sizes, and replication status cannot be reported without the underlying study data. The cardiovascular signal at rs2135942244 rests on a single variant's category assignment and should be treated as preliminary. Evidence quality assessments will be updated as SNP-level detail is incorporated.

What this is NOT

These variants are population-level statistical signals, not deterministic predictors for any individual. This page does not prescribe, diagnose, or advise any course of action.

Traits this gene affects

  • rare_disease

Top variants in ATP2B1

Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.

rsidMagnitudePrimary trait
rs10335775925.5rare_disease
rs11610611345.5rare_disease
rs14334584095.5rare_disease
rs18799935745.5rare_disease
rs25408036535.5rare_disease
rs25408039525.5rare_disease
rs25408040525.5rare_disease
rs25408828335.5rare_disease
rs9029762765.5rare_disease
rs18762054245.0rare_disease
rs18797117725.0rare_disease
rs18799930525.0rare_disease
rs18836426065.0rare_disease
rs21359422445.0cardiovascular
rs21359495705.0rare_disease
rs21360502845.0rare_disease
rs21361063605.0rare_disease
rs21361587255.0rare_disease
rs21361922675.0rare_disease
rs21361938605.0rare_disease