ATP2B1, variants, traits, and what the research shows
ATP2B1 is a human gene with variants linked to rare disease categories and a single cardiovascular association, based on current genomic databases.
- High-magnitude variants on file
- 138
- With published research summary
- 24
- Trait themes
- 1
ATP2B1 - what this gene does
Variants catalogued in ATP2B1 are associated primarily with rare disease categories, with one variant also linked to a cardiovascular trait. No SNP-level research summaries are yet available for this gene, so the entry below reflects trait-category signals drawn directly from the variant list.
Key takeaways
- The nine highest-magnitude variants in this gene are all classified under rare disease categories
- One variant, rs2135942244, is the only entry in the current dataset carrying a cardiovascular trait signal
- 138 variants are on file in total; specific condition names and effect sizes are not yet documented
- Trait labels here are broad category assignments - detailed disease names are pending SNP-level research summaries
- Population-level associations do not predict individual outcomes
Notable variants
Nine variants share the highest recorded magnitude (5.50) for this gene and are all classified under rare disease: rs1033577592, rs1161061134, rs1433458409, rs1879993574, rs2540803653, rs2540803952, rs2540804052, rs2540882833, and rs902976276. Among the magnitude-5.00 variants, rs2135942244 stands apart as the sole cardiovascular-classified entry in this dataset; the remaining magnitude-5.00 variants - including rs1876205424, rs1879711772, rs1879993052, and rs1883642606 - are also classified under rare disease.
Trait associations
The dominant trait theme across ATP2B1's catalogued variants is rare disease: all nine magnitude-5.50 variants and ten of the eleven magnitude-5.00 variants shown here carry this classification, indicating that the strongest signals in this gene cluster around rare-disease phenotypes. A single cardiovascular association is present at rs2135942244 (magnitude 5.00). Because no SNP-level summaries are yet available, specific condition names for the rare disease entries cannot be reported from the current data alone.
Evidence quality
No SNP-level research summaries are currently available for ATP2B1 - the signals above are derived solely from variant magnitude scores and broad trait-category labels. Odds ratios, beta coefficients, sample sizes, and replication status cannot be reported without the underlying study data. The cardiovascular signal at rs2135942244 rests on a single variant's category assignment and should be treated as preliminary. Evidence quality assessments will be updated as SNP-level detail is incorporated.
What this is NOT
These variants are population-level statistical signals, not deterministic predictors for any individual. This page does not prescribe, diagnose, or advise any course of action.
Traits this gene affects
- rare_disease
Top variants in ATP2B1
Highest-impact rsids on file, sorted by magnitude. Linked entries have a full research summary; unlinked entries are in the catalog but not yet written up.
| rsid | Magnitude | Primary trait |
|---|---|---|
| rs1033577592 | 5.5 | rare_disease |
| rs1161061134 | 5.5 | rare_disease |
| rs1433458409 | 5.5 | rare_disease |
| rs1879993574 | 5.5 | rare_disease |
| rs2540803653 | 5.5 | rare_disease |
| rs2540803952 | 5.5 | rare_disease |
| rs2540804052 | 5.5 | rare_disease |
| rs2540882833 | 5.5 | rare_disease |
| rs902976276 | 5.5 | rare_disease |
| rs1876205424 | 5.0 | rare_disease |
| rs1879711772 | 5.0 | rare_disease |
| rs1879993052 | 5.0 | rare_disease |
| rs1883642606 | 5.0 | rare_disease |
| rs2135942244 | 5.0 | cardiovascular |
| rs2135949570 | 5.0 | rare_disease |
| rs2136050284 | 5.0 | rare_disease |
| rs2136106360 | 5.0 | rare_disease |
| rs2136158725 | 5.0 | rare_disease |
| rs2136192267 | 5.0 | rare_disease |
| rs2136193860 | 5.0 | rare_disease |